Phosphatase Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_04224T0
SpeciesCryptococcus neoformans var. grubii H99
Gene Annotationcarboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
Gene SymbolPSR1
Phosphatase NameN/A
Phosphatase ClassHaloacid dehalogenase
KEGG Linkout KEGG::CNI03650 
Genome Browser JBrowse link goes here.
Protein Domain / KEGG Annotation
KEGG Result
KO AccessionE-valueScore
K157315.7e-105348.9
Pfam Result
Pfam AccessionE-valueScore
PF03031 Pfam 3.2e-58 194.4
Amino Acid SequenceMPTTRTEPPTVAPAISPQNTNTAGPAHTTSIDHNTSTTDTQQPSSGLQPSILPPVATPATQNLASTTEMTKDGGAAAAQPSTAQTTLPEPGTTSTSIKPTEGEQSKGTPLGNLSRRLSNKSPSTTASSAPQTTAEKADPKPASSHTQPTTSTSKTTVNTPASRSVNGATKSKTAPTSNTTAPKAGQKKKRKRKGLAGILLALGCLSVDEFEEEPSKPSSTTASVGAGKTAGAGATTGVSTKADESAKPGSGDAGMTSGALKAPNGSVAPAPSGPSAVKTQDTTVGAEQKVDATGPTGSTVVAEGSNEADKGIVPDEQVVVPPTEPHTLPDDETAGVTSSAVQPPGGGSVLLGTPSKHVSHRESETNLGTSSNERTETSGGYSDISNSEMVDESTGQGGDELGEDYLEYDDEEDRLIEQGGIGIPVDENGNPAPLLPPIAAKHRGRKCLVLDLDETLLHSSFKGENQQLPTADYIVPVEIESQVHNVYVIKRPGVDHFLTEMAKIYEIVVFTASLSKYADPVLDMLDENRVVAHRLFRESCYNHKGNYVKDLSQLGRDIQHSIIIDNSPASYIFHPNNAVPVSTWFSDPHDSELTDLCPFLADLATVDDVRGVLDGRI
Expression Data
NotationConditionNormalized Raw Expression
AYPD 30°C, concentration: 2x 10^8 cells/ml1539
BYPD 30°C, concentration: 5x10^7 cells/ml3665
CYPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml3697
DYPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml3261
EYPD 37°C, concentration: 5x10^7 cells/ml2501
FYP+galactose 30°C, concentration: 2x10^8 cells/ml2345
Gene Disruption Strategy
Mutant construction design Mutant construction design Mutant construction design Mutant construction design
Primer NameDescriptionPrimer Sequence
L1CNAG_04224 5' flanking region primer 1GGCAGAGAGAAGTTTGGTAG
L2CNAG_04224 5' flanking region primer 2TCACTGGCCGTCGTTTTACTGGGCATTTCTTCTACTGC
R1CNAG_04224 3' flanking region primer 1CATGGTCATAGCTGTTTCCTGGTTCGTGGTGTCCTTGATG
R2CNAG_04224 3' flanking region primer 2CCTTGAGCCGTTTGATGTC
SOCNAG_04224 diagnostic screening primer, pairing with B79CTGTCATTACTCGCTCAGC
POCNAG_04224 Southern blot probe primerATTCTGTGTCGCTGGAGTG
STMNAT#125 STM primerCGCTACAGCCAGCGCGCGCAAGCG
STM commonSTM common primerGCATGCCCTGCCCCTAAGAATTCG
* Red marked sequences indicate the extended M13 forward and reversed sequences to overlap PCR with pNAT plasmid.
Phenotype Assays
Growth
Growth phenotype
Mating Data
Mating phenotype
Virulence Factor Production
Capsule
Capsule phenotype
Urease
Urease phenotype
Melanin
Melanin phenotype
Stress Response and Adaptation
Osmotic Stress
Osmotic stress phenotype
Oxidative Stress
Oxidative stress phenotype
Heavy Metal Stress
Heavy metal stress phenotype
Cell Wall Stress
Cell wall stress phenotype
ER Stress
ER stress phenotype
Genotoxic Stress
Genotoxic stress phenotype
Antifungal Drug Susceptibility
Antifungal drug susceptibility
Virulence Data by the Insect Host Model (Galleria mellonella)
Galleria mellonella virulence data
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model
STM murine host model data