Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
| Species | Cryptococcus neoformans var. grubii H99 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Gene Annotation | phosphatidylinositol glycan, class O | |||||||||
| Gene Symbol | GPI13 | |||||||||
| Phosphatase Name | N/A | |||||||||
| Phosphatase Class | Alkaline phosphatase | |||||||||
| KEGG Linkout | KEGG::CNH02580 | |||||||||
| Genome Browser | JBrowse link goes here. | |||||||||
| Protein Domain / KEGG Annotation |
|
|||||||||
| Amino Acid Sequence | MPEISPQSQNGGELAKSTTKSSSWLRNLSRFNLAALILFYVACLHVIGLYVFTQGFLLSRLAIPHASPAYNVSNPSPIAAIHSKAVIIVIDALRTDFISPYYPQPPSPHHHGVLSLPAELTQSRPEHSLIFNSFSDPPTSTMQRIKGITTGSLPTFIDIGSNFASTAIEEDSLVSQLVAANKTVGFMGDDTWMNLFPSSFHPNMSHPYDSFNVEDLHTVDNGVITHLFPYLHPSNQSQWDVLIGHFLGVDHVGHRVGPHRDTMTEKLTQMNEVLEKVVDLIDEETLLVVLGDHGMDDKGNHGGDSEMETSSALWLYSKGPALINPAVVQGKDTSSIFKSLPTYTFPKSTLPLRQINQIDIVPTLALLLGIPIPYNNLGSVIPECFSNNLETLEVAQRVTAEGIWRYVEAYGDKEVKENLKTAWRHAQSQYQKGNLPASIIAHRAFSLDALAHLRSLWAQFSMPLIVIGSLILGLCALTLIALYVGVRNNGVNWDVYARLALETATMGSTVLASIAGTAAGVYTARPIVAIKVFIVSAALISEVILILPLFVKSSLSLALPLPTSFSINRHIGPFILIVHALSFASNSFIMWEDRVVVYLISTIPIIYIIRALSAPTADMRLKIIFLSLAFTILSRLAGTVTICREEQQPYCSVTFFSGVTATAPTWALIAIVPLALQIPRAIGITLSRSKSLAGPAPFILGILWRAVLVANSVYWVLEFFESFDGLNPARIPLVSFLKLWLARCSAGASLGAIPYVWLTSPLCISVERTADQATGEEEVTVFGFANAFGSTYILYTLAPFALVHLVSQPMAQLTLTAFLVGLLVYLELVDTRRDAVILTTSFASLGNNKNNNNAASPAGLASFDPADTAQTIVRPSFTDVVPLALYGFLTFFATGHQAVISSIQWKSAFVGFSTANYLFSPVLVVLNTWGGFFLSAIAVPLLAIWNIAPRPRESIPTLAHALQVTLAFLVYHTVVAFASAVTAAWLRRHLMVWKVFAPRFMMAGVTLLVVDVGLALGLFGVRVTGWKVKKTFGCESI | |||||||||
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 3708 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 2911 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 3133 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 3374 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 3664 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 3253 |
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_05617 5' flanking region primer 1 | TTGTTGACCGATGCCAAG |
| L2 | CNAG_05617 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACGTTCTCCACCATTTTGGGAC |
| R1 | CNAG_05617 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGTTTGGAGTGAGAGTGACCG |
| R2 | CNAG_05617 3' flanking region primer 2 | AAGTCTGACGCTGTCTCTG |
| SO | CNAG_05617 diagnostic screening primer, pairing with B79 | TTACCGTAGGTGAGACCGTC |
| PO | CNAG_05617 Southern blot probe primer | ATGGGTGAGGGGTTGGATAC |
| STM | NAT#218 STM primer | CTCCACATCCATCGCTCCAA |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |