Phosphatase Browser

Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.

Detailed Locus Information for CNAG_00390T0
SpeciesCryptococcus neoformans var. grubii H99
Gene Annotationmyotubularin
Gene SymbolYMR1
Phosphatase NameN/A
Phosphatase ClassProtein tyrosine phosphatase
KEGG Linkout KEGG::CNA03790 
Genome Browser JBrowse link goes here.
Protein Domain / KEGG Annotation
KEGG Result
KO AccessionE-valueScore
K180835.7e-214711.4
Pfam Result
Pfam AccessionE-valueScore
PF06602 Pfam 5.1e-145 481.2
Amino Acid SequenceMDALRVARVDNVTIQYFLPPTAPDQKPTPLTQIGQLHLTPHHLIFSHTPSTAYEPEIWIPYPLITRLTRLPQTINGLYPLQVETKTFESYVLLFTKDRDDGAEEVWQSVKDCSVKSSVEQLYAFFYVPPSPGTGWTVFNHRTEFARQGLGTRTKAWRFTDINKDYSFSPTYPSKLVVPSRISDSTLMYAGKYRSKARIPALTYLHWANNASITRSSQPMVGIKNSRSSQDERLVECIFSSHMFLDNAYSSAPIFGATSTNLIIDARPTTNAMANVAMGAGTENMENYKLGKKAYLGIDNIHVMRNSLKTVAEAIREANLRPSVPLNRALLRKSNWLRHISTILDGALIIVRNIHLNASHVLIHCSDGWDRTGQLSAVAQICLDPYYRTFDGFKVLVEKDWLAFGHKFLDRSGHLSSEKYFMVTENDDDMEEEGVSAQRAAQAFFATVQKQFTSTSHLKEISPVFHQFLDCVRQIQRQFPERFEFNEQYLLDIYRHLYTCQFGTFLFNNERERQESASPSRKSFVEQTCSVWDYLDSPSEREKYINSLYDTTLDSNQSRDAGADQGVLFYNPKDVRFWFRLFGRGDEEMNGSSLTLNQPQGVDIIGPIGGDQVEDMAAGEILRGASPVSAPSPHATASQSRSWNWSQLSGNALNAVHSAAREIKSISQDALSQIRAEANELDRESWEQDGKGKNSEPASLTESTLLPETNPWSAEARSSPTIPPPRPNTQVSRTTQNPWAAMPDTITSLSNLTLDGKAPGSPANDAGTKERAGEKQQKAWDPLGAL
Expression Data
NotationConditionNormalized Raw Expression
AYPD 30°C, concentration: 2x 10^8 cells/ml3523
BYPD 30°C, concentration: 5x10^7 cells/ml2872
CYPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml3339
DYPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml1934
EYPD 37°C, concentration: 5x10^7 cells/ml2378
FYP+galactose 30°C, concentration: 2x10^8 cells/ml3551
Gene Disruption Strategy
Mutant construction design Mutant construction design Mutant construction design Mutant construction design
Primer NameDescriptionPrimer Sequence
L1CNAG_00390 5' flanking region primer 1TACTATGTGGGCGAGAAGG
L2CNAG_00390 5' flanking region primer 2TCACTGGCCGTCGTTTTACTGCTACTCGTAATGCGTCC
R1CNAG_00390 3' flanking region primer 1CATGGTCATAGCTGTTTCCTGAGCAACAAAAGGCTTGGG
R2CNAG_00390 3' flanking region primer 2GCTTGTTCTCCTGAAGTTTGG
SOCNAG_00390 diagnostic screening primer, pairing with B79CCAGACAAAAGGCTCTTAGTG
PO1CNAG_00390 Southern blot probe primer 1AGACTTCCACTTTTACCGC
PO2CNAG_00390 Southern blot probe primer 2GTCGGAGAAAAAGAGTAGTCC
STMNAT#5 STM primerTGCTAGAGGGCGGGAGAGTT
STM commonSTM common primerGCATGCCCTGCCCCTAAGAATTCG
* Red marked sequences indicate the extended M13 forward and reversed sequences to overlap PCR with pNAT plasmid.
Phenotype Assays
Growth
Growth phenotype
Mating Data
Mating phenotype
Virulence Factor Production
Capsule
Capsule phenotype
Urease
Urease phenotype
Melanin
Melanin phenotype
Stress Response and Adaptation
Osmotic Stress
Osmotic stress phenotype
Oxidative Stress
Oxidative stress phenotype
Heavy Metal Stress
Heavy metal stress phenotype
Cell Wall Stress
Cell wall stress phenotype
ER Stress
ER stress phenotype
Genotoxic Stress
Genotoxic stress phenotype
Antifungal Drug Susceptibility
Antifungal drug susceptibility
Virulence Data by the Insect Host Model (Galleria mellonella)
Galleria mellonella virulence data
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model
STM murine host model data