Detailed locus information, expression profile, gene disruption strategy, and phenotype assay data.
| Species | Cryptococcus neoformans var. grubii H99 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Gene Annotation | RNA polymerase II subunit A domain phosphatase | |||||||||
| Gene Symbol | FCP1 | |||||||||
| Phosphatase Name | N/A | |||||||||
| Phosphatase Class | Haloacid dehalogenase | |||||||||
| KEGG Linkout | KEGG::CNI04270 | |||||||||
| Genome Browser | JBrowse link goes here. | |||||||||
| Protein Domain / KEGG Annotation |
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| Amino Acid Sequence | MSDPPTPLTLPPTLPYPITLTRLVARPGDKVKRGSRLFEYTFMSSDLKEKVARRRSQEGGTGEIEDEKEKDDLSGTWESLVDGDVVEWKGAKQGMVIERNQASQVIVTVQQACSHPVQLHGMCGVCGADLTEDDYLSRPASNQTQAGPSRYPGGFEIAHDAMGVTVSKNEAQRLENLTRDALLSTRRLSLIVDLDQTIIHTTVDPTVAEWMDEIHREESEDDQEKAKVPMEGAKGKGEETTTPPGSPGPSALSVTVEQPKEKNPNAEALRDVAKFQIADDLPPGYVKLKTKTTKGQNPPESEGRWYFTKPRPGLQKFLDEMSQLYEMHVYTMGTRTYADAIVKVIDPDGKIFGGRILSRDESGSFSSKNLKRLFPTDTSMVVVIDDRSDVWGDCPNLVKVVPYDFFLGIGDINSSFLPTNKSTPPPSSAATTAAAASSSSAHSSPSLSTSSSPPPTLPPSPPSASSIASTPPPVTPSEVSADLEPIERVEPVEPTREEELMMKAKLLDQLSTSRPLARLQEELEKEDSEDDESGEGQDDVAKAEMKKTAGKEEEKEKGYEEKAVTRVGDDSRKERSKSPNKHRKPLLNPNDYELVRVANILQEIHSRFYKAFDALDGWNPKKALPMSCDVEFIIPEMKAEVLDGCSLVFSGMIPRESNPSTTTIWQTAESFGALITPSLTPRTTHLVTALLNTEKTWRAGKMEGVKVVWAEWFWDSVALWERQNEEKYIAGKKEGADDTGKGAGAEGEARNNDNHKDLKEEDEDGEEHEDMNDDTQVGQGWDEEAEREWEEFMAGEDDWSDEEGSVGSKKSVGSVKNESAPPTPSKKRVRYADEELLPLEEFKDPSPTASSDAPPSKRHKTYLVEDTKPGQEGSGESQSRHKDYGMYEADVEKDTEKAGDENGGRSAERMDGTEGDDEFALLLMNSLANDDADGDENNDGDSVVVGEK | |||||||||
| Notation | Condition | Normalized Raw Expression |
|---|---|---|
| A | YPD 30°C, concentration: 2x 10^8 cells/ml | 3416 |
| B | YPD 30°C, concentration: 5x10^7 cells/ml | 3469 |
| C | YPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml | 3332 |
| D | YPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml | 2941 |
| E | YPD 37°C, concentration: 5x10^7 cells/ml | 2721 |
| F | YP+galactose 30°C, concentration: 2x10^8 cells/ml | 3745 |
| Primer Name | Description | Primer Sequence |
|---|---|---|
| L1 | CNAG_04120 5' flanking region primer 1 | CACTATTATCTCGGTGTGTCG |
| L2 | CNAG_04120 5' flanking region primer 2 | TCACTGGCCGTCGTTTTACAAGGGTCAATGGGGTAGGTG |
| R1 | CNAG_04120 3' flanking region primer 1 | CATGGTCATAGCTGTTTCCTGTAGCAAACGATGACGCCGATGG |
| R2 | CNAG_04120 3' flanking region primer 2 | ACTGACATCACTATCGGAGG |
| SO | CNAG_04120 diagnostic screening primer, pairing with B79 | GCGTCCACATTATCAGCAAC |
| PO | CNAG_04120 Southern blot probe primer | TCAACCAAACTCTCCCACG |
| STM | NAT#43 STM primer | CCAGCTACCAATCACGCTAC |
| STM common | STM common primer | GCATGCCCTGCCCCTAAGAATTCG |